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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108266238Phosphodiesterase. (534 aa)    
Predicted Functional Partners:
gucy1a1
Guanylate cyclase Soluble subunit alpha-3; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family.
   
 0.770
LOC108273417
Guanylate cyclase.
   
 0.767
LOC108272812
Guanylate cyclase.
   
 0.767
LOC108267421
Guanylate cyclase.
   
 0.749
gucy2f
Guanylate cyclase.
   
 0.749
LOC108278263
Guanylate cyclase.
   
 0.749
LOC108259769
Guanylate cyclase.
   
 0.749
LOC108280635
Guanylate cyclase soluble subunit beta-2-like; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family.
   
 0.747
LOC108259334
Guanylate cyclase soluble subunit beta-2-like isoform X1; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family.
   
 0.747
LOC108273580
Guanylate cyclase.
   
 0.746
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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