Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSIPUP00000001723annotation not available (410 aa)    
Predicted Functional Partners:
rbbp6
E3 ubiquitin-protein ligase RBBP6 isoform X1.
    
 0.791
ino80b
INO80 complex subunit B isoform X2.
   
 0.669
asxl2
Putative Polycomb group protein ASXL2 isoform X2.
   
 0.654
LOC108265298
Multiple epidermal growth factor-like domains protein 9 isoform X2.
    
 
 0.639
hacd4
Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase; Catalyzes the third of the four reactions of the long-chain fatty acids elongation cycle. This endoplasmic reticulum-bound enzymatic process, allows the addition of two carbons to the chain of long- and very long-chain fatty acids/VLCFAs per cycle. This enzyme catalyzes the dehydration of the 3-hydroxyacyl-CoA intermediate into trans-2,3-enoyl-CoA, within each cycle of fatty acid elongation. Thereby, it participates to the production of VLCFAs of different chain lengths that are involved in multiple biological processes as precursors [...]
    
 
 0.619
zcchc17
Nucleolar protein of 40 kDa.
    
 0.617
trip12
E3 ubiquitin-protein ligase TRIP12.
    
 0.609
cdh13
LOW QUALITY PROTEIN: cadherin-13.
      
 0.584
acss3
acyl-CoA synthetase short-chain family member 3, mitochondrial.
    
 
 0.567
ENSIPUP00000029707
annotation not available
      
 0.536
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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