Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
hey1Hairy/enhancer-of-split related with YRPW motif protein 1. (318 aa)    
Predicted Functional Partners:
LOC108256789
Hairy/enhancer-of-split related with YRPW motif-like protein.
  
  
 
0.903
hey2
Hairy/enhancer-of-split related with YRPW motif protein 2.
  
  
 
0.901
dll4
Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.
    
 0.854
LOC108279276
Neurogenic locus notch homolog protein 1-like.
    
 0.791
LOC108255797
Neurogenic locus notch homolog protein 1-like.
    
 0.791
LOC108260898
Recombining binding protein suppressor of hairless-like.
    
 0.790
LOC108257003
Neurogenic locus notch homolog protein 2-like isoform X1.
    
 0.718
LOC108265554
Neurogenic locus notch homolog protein 2-like.
    
 0.709
jag1
Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.
    
 0.677
pggt1b
Geranylgeranyl transferase type-1 subunit beta.
    
 
 0.662
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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