Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC108270628Zinc finger and BTB domain-containing protein 7A-like. (575 aa)    
Predicted Functional Partners:
arid3a
AT-rich interactive domain-containing protein 3A isoform X1.
    
 0.641
imp4
U3 small nucleolar ribonucleoprotein protein IMP4.
    
   0.536
ncor2
Nuclear receptor corepressor 2 isoform X2.
   
 0.516
ncor1
Nuclear receptor corepressor 1 isoform X16.
   
 0.516
phkb
Phosphorylase b kinase regulatory subunit; Phosphorylase b kinase catalyzes the phosphorylation of serine in certain substrates, including troponin I. Belongs to the phosphorylase b kinase regulatory chain family.
      
 0.513
hdac8
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
  0.480
HDAC2
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
  0.480
LOC108272688
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
  0.480
LOC108275086
Lamina-associated polypeptide 2, isoforms beta/gamma-like isoform X1.
    
 0.480
sap18
Histone deacetylase complex subunit SAP18; Involved in the tethering of the SIN3 complex to core histone proteins.
    
 0.471
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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