Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
glra1Glycine receptor subunit alpha-1 isoform X2; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (446 aa)    
Predicted Functional Partners:
LOC108270253
Gephyrin isoform X1.
    
 
 0.784
gphn
Gephyrin.
    
 
 0.784
LOC108260895
Glycine receptor subunit beta-like isoform X2; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
   
  0.726
glrb
Glycine receptor subunit beta; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
   
  0.726
slc6a5
Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.
   
  
 0.561
LOC108260443
Myelin proteolipid protein-like.
   
  
 0.436
plp1
Myelin proteolipid protein isoform X2.
   
  
 0.436
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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