Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
poc1aPOC1 centriolar protein homolog A. (428 aa)    
Predicted Functional Partners:
rbbp5
Retinoblastoma-binding protein 5 isoform X1.
   
 0.826
ash2l
set1/Ash2 histone methyltransferase complex subunit ASH2 isoform X1.
   
 0.823
ENSIPUP00000027367
WD repeat domain 82.
   
 0.774
kansl3
KAT8 regulatory NSL complex subunit 3 isoform X1.
    
 0.751
phf20
PHD finger protein 20 isoform X3.
    
 0.747
kansl2
KAT8 regulatory NSL complex subunit 2 isoform X1.
    
 0.732
LOC108265945
CXXC-type zinc finger protein 1-like.
    
 0.708
LOC108255043
CXXC-type zinc finger protein 1-like isoform X1.
    
 0.708
UNC79
Protein unc-79 homolog isoform X3.
    
 0.703
sgf29
SAGA-associated factor 29 isoform X1.
    
 0.688
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
Server load: low (8%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.