Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
scpep1Carboxypeptidase; Belongs to the peptidase S10 family. (439 aa)    
Predicted Functional Partners:
ahdc1
AT-hook DNA-binding motif-containing protein 1.
      
 0.615
c12h17orf67
Uncharacterized protein C17orf67 homolog.
      
 0.614
LOC108266320
Pituitary tumor-transforming gene 1 protein-interacting protein-like isoform X1.
      
 0.597
pttg
Pituitary tumor-transforming gene 1 protein-interacting protein.
      
 0.597
morf4l1
Mortality factor 4-like protein 1.
   
   0.542
dgke
Diacylglycerol kinase.
      
 0.487
LOC108278245
A-kinase anchor protein 1, mitochondrial-like.
      
 0.478
cpn1
Carboxypeptidase N catalytic chain.
      
 0.478
impa1
Inositol-1-monophosphatase.
   
   0.446
impa2
Inositol-1-monophosphatase.
   
   0.446
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
Server load: medium (48%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.