Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
tlcd3bProtein FAM57B. (294 aa)    
Predicted Functional Partners:
kctd13
BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 1.
      
 0.754
kif22
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
      
 0.754
asphd1
Aspartate beta-hydroxylase domain-containing protein 1.
      
 0.753
sez6l2
Seizure 6-like protein 2 isoform X1.
   
 
 0.746
doc2a
Double C2-like domain-containing protein alpha isoform X1.
      
 0.699
LOC108273910
Serine/threonine-protein kinase TAO2-like isoform X2.
      
 0.628
LOC108256211
Glycerophosphodiester phosphodiesterase domain-containing protein 3-like isoform X1.
      
 0.615
lrguk
Leucine-rich repeat and guanylate kinase domain-containing protein isoform X1.
    
 
 0.593
LOC108267396
Serine/threonine-protein kinase PRP4 homolog isoform X2.
      
 0.585
LOC108259066
Protein yippee-like; Belongs to the yippee family.
      
 0.554
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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