Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC108260714Krueppel-like factor 3 isoform X2. (499 aa)    
Predicted Functional Partners:
foxa3
Hepatocyte nuclear factor 3-gamma.
    
 0.788
KCNK4
Potassium channel subfamily K member 4-like; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.
      
 0.574
LOC108271124
Multiple C2 and transmembrane domain-containing protein 2-like isoform X1.
      
 0.571
LOC108279325
POU domain protein.
    
 0.473
glrx5
Glutaredoxin-related protein 5, mitochondrial.
   
 
 0.454
LOC108273515
Adhesion G protein-coupled receptor A1-like.
   
 0.453
nfs1
Cysteine desulfurase, mitochondrial.
     
 0.449
LOC108254855
Fer-1-like protein 4.
      
 0.435
llgl2
Lethal(2) giant larvae protein homolog 2 isoform X1.
      
 0.435
prkrip1
PRKR-interacting protein 1.
      
 0.435
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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