Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
slc25a48Solute carrier family 25 member 48; Belongs to the mitochondrial carrier (TC 2.A.29) family. (313 aa)    
Predicted Functional Partners:
LOC108275053
MICOS complex subunit; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.
    
 
 0.781
etfdh
Electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone.
   
  
 0.634
mlf1
Myeloid leukemia factor 1.
      
 0.629
txndc15
Thioredoxin domain-containing protein 15 isoform X2.
      
 0.628
aasdh
acyl-CoA synthetase family member 4 isoform X1.
   
  
 0.622
slc25a46
Solute carrier family 25 member 46; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.615
LOC108279062
Vesicle transport protein SEC20-like isoform X1.
      
 0.598
LOC108280555
Ras-related protein Rab-35-like isoform X2.
      
 0.560
ambra1
Activating molecule in BECN1-regulated autophagy protein 1 isoform X3.
    
 
 0.556
mst1
Hepatocyte growth factor-like protein isoform X3; Belongs to the peptidase S1 family. Plasminogen subfamily.
    
 
 0.544
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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