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Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
coilCoilin. (659 aa)    
Predicted Functional Partners:
smn1
Survival motor neuron protein 1 isoform X1.
    
 0.955
psme3
Proteasome activator complex subunit 3.
    
 
 0.937
LOC108272150
Small nuclear ribonucleoprotein-associated protein.
    
 0.931
sart3
Squamous cell carcinoma antigen recognized by T-cells 3.
   
 
 0.928
wrap53
Telomerase Cajal body protein 1.
    
 
 0.883
ncor2
Nuclear receptor corepressor 2 isoform X2.
   
 0.834
ncor1
Nuclear receptor corepressor 1 isoform X16.
   
 0.834
hdac8
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
   
 0.771
HDAC2
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
   
 0.771
hdac3
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
   
 0.771
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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