Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
gclmGlutamate--cysteine ligase regulatory subunit. (271 aa)    
Predicted Functional Partners:
gclc
Glutamate--cysteine ligase catalytic subunit.
   
 0.999
gss
Glutathione synthetase.
   
 0.989
oplah
5-oxoprolinase.
   
 
 0.939
ANPEP
Aminopeptidase.
   
 
  0.924
LOC101154672
Aminopeptidase.
   
 
  0.924
anpep
Aminopeptidase.
   
 
  0.924
ggt7
Gamma-glutamyltransferase 7.
   
 
 0.921
LOC108278805
Branched-chain-amino-acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
  
 0.913
ggt6
Gamma-glutamyltransferase 6.
   
 
 0.913
LOC108264906
Gamma-glutamyltranspeptidase 1-like.
   
 
 0.913
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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