Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC108268819Transmembrane protein 216-like isoform X2. (139 aa)    
Predicted Functional Partners:
tmem67
Meckelin.
   
 
 0.989
b9d1
B9 domain-containing protein 1.
     
 0.974
cc2d2a
Coiled-coil and C2 domain-containing protein 2A isoform X3.
     
 0.972
b9d2
B9 domain-containing protein 2.
     
 0.966
ahi1
Jouberin isoform X3.
     
 0.964
mks1
Meckel syndrome type 1 protein.
     
 0.963
tctn1
Tectonic-1 isoform X1.
     
 0.908
rpgrip1l
Protein fantom.
      
 0.867
LOC108274004
Tectonic-3-like isoform X1.
     
 0.862
tmem231
Transmembrane protein 231.
   
  
 0.854
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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