Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cby1Protein chibby homolog 1. (125 aa)    
Predicted Functional Partners:
ctnnb1
Catenin beta-1 isoform X3.
    
 0.821
LOC108256545
Catenin beta-1-like.
    
 0.780
LOC108270763
Junction plakoglobin-like isoform X1.
    
 0.712
LOC108257253
Junction plakoglobin-like.
    
 0.712
LOC108279217
Uridine-cytidine kinase; Belongs to the uridine kinase family.
    
 0.710
uck2
Uridine-cytidine kinase; Belongs to the uridine kinase family.
    
 0.710
uckl1
Uridine-cytidine kinase; Belongs to the uridine kinase family.
    
 0.710
uck1
Uridine-cytidine kinase; Belongs to the uridine kinase family.
    
 0.710
LOC108267616
Uridine-cytidine kinase; Belongs to the uridine kinase family.
    
 0.710
LOC100305105
14-3-3 protein beta/alpha-A; Belongs to the 14-3-3 family.
    
  0.675
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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