Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
elavl4ELAV-like protein; Belongs to the RRM elav family. (451 aa)    
Predicted Functional Partners:
LOC108258698
Transformer-2 protein homolog beta-like isoform X2.
  
 0.609
rbm45
RNA-binding protein 45.
    
   0.587
LOC108272935
RNA binding protein fox-1 homolog 2-like isoform X2.
  
 
 0.579
LOC108271996
RNA-binding protein 38-like.
  
   
 0.579
ENSIPUP00000032692
RNA binding fox-1 homolog 3b.
  
 0.578
pum1
Pumilio homolog 1 isoform X1.
   
 
 0.563
LOC108266326
Transformer-2 protein homolog beta-like.
  
 0.560
LOC108263593
RNA binding protein fox-1 homolog; RNA-binding protein that regulates alternative splicing events.
  
 0.555
ilf2
Interleukin enhancer-binding factor 2.
   
 
 0.548
LOC108273414
RNA binding protein fox-1 homolog; RNA-binding protein that regulates alternative splicing events.
  
 0.538
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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