Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
LOC108280897Suppressor of cytokine signaling 6-like. (504 aa)    
Predicted Functional Partners:
eloc
Transcription elongation factor B polypeptide 1 isoform X1; Belongs to the SKP1 family.
    
 0.905
cul5
Cullin-5 isoform X1; Belongs to the cullin family.
   
 0.905
LOC108280902
Transcription elongation factor B polypeptide 2-like.
    
 0.815
elob
Transcription Elongation factor B polypeptide 2.
    
 0.815
LOC108263298
Suppressor of cytokine signaling 5-like isoform X1.
     
0.802
SOCS5
Suppressor of cytokine signaling 5-like.
     
0.795
LOC108265322
Zinc finger protein Xfin-like.
     
 0.758
LOC108272001
Cytokine-inducible SH2-containing protein-like.
     
0.731
LOC108254847
Cytokine-inducible SH2-containing protein-like.
     
0.731
socs3
Suppressor of cytokine signaling 3.
     
0.724
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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