Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
dmrta2Doublesex- and mab-3-related transcription factor A2. (432 aa)    
Predicted Functional Partners:
wdr24
WD repeat-containing protein 24 isoform X1.
    
 0.674
kptn
Kaptin.
    
 0.661
SZT2
Protein SZT2 isoform X10.
    
 0.655
armh1
Uncharacterized protein C1orf228 homolog.
      
 0.615
depdc5
DEP domain-containing protein 5.
   
 0.604
wdr59
WD repeat-containing protein 59 isoform X5.
    
 0.593
nprl2
Nitrogen permease regulator 2-like protein.
    
 0.585
tex9
Testis-expressed sequence 9 protein.
      
 0.526
Tex9
Testis expressed 9.
      
 0.526
maats1
Protein MAATS1.
      
 0.512
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.