close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108274578Uncharacterized protein LOC108274578 isoform X1. (218 aa)    
Predicted Functional Partners:
itgb1
Integrin beta; Belongs to the integrin beta chain family.
    
  0.908
itgb3
Integrin beta; Belongs to the integrin beta chain family.
    
  0.908
itgb6
Integrin beta; Belongs to the integrin beta chain family.
    
  0.908
itgb1-2
Integrin beta; Belongs to the integrin beta chain family.
    
  0.908
LOC108279461
Integrin beta; Belongs to the integrin beta chain family.
    
  0.908
itgav
Integrin alpha-V; Belongs to the integrin alpha chain family.
    
  0.904
itga9
Integrin alpha-9; Belongs to the integrin alpha chain family.
    
  0.904
itga8
Integrin alpha-8; Belongs to the integrin alpha chain family.
    
  0.904
sdc1
Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.
     
  0.902
LOC108272016
Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.
     
  0.900
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.