Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSIPUP00000001987annotation not available (85 aa)    
Predicted Functional Partners:
pgbd5
PiggyBac transposable element-derived protein 5.
    
 
 0.606
mphosph6
M-phase phosphoprotein 6.
      
 0.591
mrps2
28S ribosomal protein S2, mitochondrial.
   
 0.536
ppp1r26
Protein phosphatase 1 regulatory subunit 26.
   
 0.536
rnf170
E3 ubiquitin-protein ligase RNF170.
      
 0.523
tmem134
Transmembrane protein 134.
      
 0.522
slc25a27
Mitochondrial uncoupling protein 4 isoform X1; Belongs to the mitochondrial carrier (TC 2.A.29) family.
     
 0.522
LOC108266093
Thioredoxin domain-containing protein 3 homolog; Belongs to the NDK family.
    
 0.428
mysm1
Histone H2A deubiquitinase MYSM1.
    
  0.426
pdcd2l
Programmed cell death protein 2-like isoform X1.
    
 0.405
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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