STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSIPUP00000002016Utrophin-like. (232 aa)    
Predicted Functional Partners:
ENSIPUP00000013397
annotation not available
 
    
 0.916
ENSIPUP00000009365
annotation not available
 
   
 0.565
neb
Nebulin isoform X1.
     
 0.542
ctnnal1
Alpha-catulin isoform X1.
   
 
 0.536
dag1
Dystroglycan.
    
 0.526
LOC108265115
Dystroglycan-like isoform X1.
    
 0.526
LOC108275814
Utrophin-like isoform X1; May play a role in anchoring the cytoskeleton to the plasma membrane.
 
      0.503
LOC108268520
Beta-2-syntrophin-like.
    
 
 0.488
LOC108271954
Carboxyl-terminal PDZ ligand of neuronal nitric oxide synthase protein-like.
      
 0.448
LOC108267139
Carboxyl-terminal PDZ ligand of neuronal nitric oxide synthase protein-like.
      
 0.448
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
Server load: medium (78%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.