close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
faf1FAS-associated factor 1. (663 aa)    
Predicted Functional Partners:
vcp
Transitional Endoplasmic reticulum ATPase; Belongs to the AAA ATPase family.
   
 0.994
ufd1
Ubiquitin fusion degradation protein 1 homolog isoform X2.
    
 
 0.969
ubxn1
UBX domain protein 1.
   
 
 0.963
ubxn7
UBX domain-containing protein 7.
    
 
0.963
ubxn6
UBX domain-containing protein 6 isoform X1.
    
 
 0.952
fadd
FAS-associated death domain protein.
   
 0.951
aspscr1
Tether containing UBX domain for GLUT4 isoform X1.
    
 
 0.944
nsfl1c
NSFL1 cofactor p47.
    
 
 0.923
btbd9
BTB/POZ domain-containing protein 9 isoform X1.
    
   0.917
spata5
Spermatogenesis-associated protein 5.
   
 0.867
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
Server load: medium (56%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.