Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSIPUP00000002124annotation not available (232 aa)    
Predicted Functional Partners:
LOC100304653
Hypoxia induced factor-like factor.
    
 0.837
vhl
Von Hippel-Lindau disease tumor suppressor.
    
 0.807
LOC100305068
Hypoxia induced factor 1 alpha.
    
 0.795
LOC108273968
Endothelial PAS domain-containing protein 1-like isoform X1.
    
 0.791
ENSIPUP00000011548
Endothelial PAS domain-containing protein 1-like.
    
 0.791
epas1
Endothelial PAS domain-containing protein 1 isoform X1.
    
 0.791
eloc
Transcription elongation factor B polypeptide 1 isoform X1; Belongs to the SKP1 family.
     
 0.679
cul2
Cullin-2 isoform X1; Belongs to the cullin family.
     
 0.637
fkbp8
Peptidylprolyl isomerase.
   
 
 0.631
npas3
Neuronal PAS domain-containing protein 3 isoform X1.
    
 0.620
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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