Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC108255495WD repeat-containing protein 26. (611 aa)    
Predicted Functional Partners:
armc8
Armadillo repeat-containing protein 8.
   
 0.988
rmnd5b
Protein RMD5 homolog B isoform X1.
  
 0.985
gid4
Glucose-induced degradation protein 4 homolog.
    
 0.980
maea
Macrophage erythroblast attacher.
    
 0.975
mkln1
Muskelin.
   
 0.964
ranbp9
Ran-binding protein 9 isoform X1.
   
 0.948
ranbp10
Ran-binding protein 10 isoform X3.
   
 0.948
LOC108266002
Glucose-induced degradation protein 8 homolog.
   
 0.942
LOC108276161
Glucose-induced degradation protein 8 homolog.
   
 0.942
spryd3
SPRY domain-containing protein 3 isoform X2.
   
 0.879
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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