ENSIPUP00000002148 protein (Ictalurus punctatus)

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[Homology]

Score

ENSIPUP00000002148

annotation not available (49 aa)

Predicted Functional Partners:

lsm3

0.995

lsm6

0.993

lsm2

0.992

lsm8

0.991

lsm4

0.990

lsm7

0.990

lsm1

0.986

snrpf

0.978

snrpe

0.975

c4h19orf54

0.961

Your Current Organism:

Ictalurus punctatus

NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSIPUP00000002148	c4h19orf54	ENSIPUP00000002148	ENSIPUP00000013010	annotation not available	UPF0692 protein C19orf54 homolog.	0.961
ENSIPUP00000002148	lsm1	ENSIPUP00000002148	ENSIPUP00000003254	annotation not available	U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs.	0.986
ENSIPUP00000002148	lsm2	ENSIPUP00000002148	ENSIPUP00000015483	annotation not available	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.992
ENSIPUP00000002148	lsm3	ENSIPUP00000002148	ENSIPUP00000013467	annotation not available	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.995
ENSIPUP00000002148	lsm4	ENSIPUP00000002148	ENSIPUP00000007808	annotation not available	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.990
ENSIPUP00000002148	lsm6	ENSIPUP00000002148	ENSIPUP00000006504	annotation not available	U6 snRNA-associated Sm-like protein LSm6.	0.993
ENSIPUP00000002148	lsm7	ENSIPUP00000002148	ENSIPUP00000036921	annotation not available	U6 snRNA-associated Sm-like protein LSm7.	0.990
ENSIPUP00000002148	lsm8	ENSIPUP00000002148	ENSIPUP00000029319	annotation not available	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.991
ENSIPUP00000002148	snrpe	ENSIPUP00000002148	ENSIPUP00000006614	annotation not available	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.975
ENSIPUP00000002148	snrpf	ENSIPUP00000002148	ENSIPUP00000028083	annotation not available	Small Nuclear ribonucleoprotein F.	0.978
c4h19orf54	ENSIPUP00000002148	ENSIPUP00000013010	ENSIPUP00000002148	UPF0692 protein C19orf54 homolog.	annotation not available	0.961
c4h19orf54	lsm1	ENSIPUP00000013010	ENSIPUP00000003254	UPF0692 protein C19orf54 homolog.	U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs.	0.968
c4h19orf54	lsm2	ENSIPUP00000013010	ENSIPUP00000015483	UPF0692 protein C19orf54 homolog.	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.980
c4h19orf54	lsm4	ENSIPUP00000013010	ENSIPUP00000007808	UPF0692 protein C19orf54 homolog.	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.968
c4h19orf54	lsm6	ENSIPUP00000013010	ENSIPUP00000006504	UPF0692 protein C19orf54 homolog.	U6 snRNA-associated Sm-like protein LSm6.	0.980
c4h19orf54	lsm7	ENSIPUP00000013010	ENSIPUP00000036921	UPF0692 protein C19orf54 homolog.	U6 snRNA-associated Sm-like protein LSm7.	0.973
c4h19orf54	lsm8	ENSIPUP00000013010	ENSIPUP00000029319	UPF0692 protein C19orf54 homolog.	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.971
c4h19orf54	snrpe	ENSIPUP00000013010	ENSIPUP00000006614	UPF0692 protein C19orf54 homolog.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.947
c4h19orf54	snrpf	ENSIPUP00000013010	ENSIPUP00000028083	UPF0692 protein C19orf54 homolog.	Small Nuclear ribonucleoprotein F.	0.936
lsm1	ENSIPUP00000002148	ENSIPUP00000003254	ENSIPUP00000002148	U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs.	annotation not available	0.986