Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
sez6l2Seizure 6-like protein 2 isoform X1. (892 aa)    
Predicted Functional Partners:
asphd1
Aspartate beta-hydroxylase domain-containing protein 1.
   
  
 0.934
kctd13
BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 1.
    
 0.919
kif22
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.854
LOC108273486
Tumor suppressor candidate 5 homolog isoform X2.
    
 0.766
cdipt
CDP-diacylglycerol--inositol 3-phosphatidyltransferase.
    
 
 0.762
doc2a
Double C2-like domain-containing protein alpha isoform X1.
   
  
 0.762
LOC108259066
Protein yippee-like; Belongs to the yippee family.
   
 
 0.755
tlcd3b
Protein FAM57B.
   
 
 0.746
pagr1
PAXIP1-associated glutamate-rich protein 1.
     
 0.705
LOC108273910
Serine/threonine-protein kinase TAO2-like isoform X2.
      
 0.696
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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