Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC108279194Nectin-1-like isoform X1. (494 aa)    
Predicted Functional Partners:
afdn
Afadin isoform X10.
    
 0.991
LOC108279084
Nectin-3-like protein.
    
0.987
LOC108278241
Nectin-3-like protein.
    
0.987
LOC108267696
Poliovirus receptor-related protein 4.
    
0.967
LOC108266341
Poliovirus receptor-like isoform X1.
   
 
0.934
pard3
Partitioning defective 3 homolog isoform X1.
    
 0.919
nectin1
Nectin-1 isoform X1.
  
  
 
0.902
LOC108266567
Nectin-4-like isoform X1.
    
 0.883
LOC108280452
Nectin-4-like isoform X1.
     
 
0.851
LOC108277327
Cell adhesion molecule 2-like isoform X2.
    
  0.585
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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