Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
tomm22Mitochondrial import receptor subunit TOM22 homolog. (133 aa)    
Predicted Functional Partners:
TOMM7
Mitochondrial import receptor subunit TOM7 homolog.
   
 0.999
tomm70
Mitochondrial import receptor subunit TOM70.
   
 0.999
tomm5
Mitochondrial import receptor subunit tom5-like protein.
   
 0.998
tomm20
Mitochondrial import receptor subunit tom20-like protein.
   
 0.998
tomm6
Mitochondrial import receptor subunit TOM6 homolog.
   
 0.997
LOC108272680
Mitochondrial import receptor subunit TOM40 homolog.
   
 0.956
LOC108272662
Mitochondrial import receptor subunit TOM40 homolog.
   
 0.949
TOMM40L
Mitochondrial import receptor subunit TOM40B-like.
   
 0.949
pink1
Serine/threonine-protein kinase PINK1, mitochondrial.
    
 0.937
LOC108269863
Uncharacterized protein LOC108269863.
   
 0.914
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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