Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
alkbh5RNA demethylase ALKBH5. (372 aa)    
Predicted Functional Partners:
fto
Alpha-ketoglutarate-dependent dioxygenase FTO isoform X1.
     
 0.985
wtap
pre-mRNA-splicing regulator WTAP isoform X1.
   
  
 0.936
mettl14
N6-adenosine-methyltransferase subunit METTL14 isoform X1; Belongs to the MT-A70-like family.
   
  
 0.935
LOC108265821
YTH domain-containing family protein 1-like isoform X2.
      
 0.933
ythdf2
YTH domain-containing family protein 2.
      
 0.932
alkbh1
DNA oxidative demethylase ALKBH1.
      
 0.923
ythdf3
YTH domain-containing family protein 3.
      
 0.919
ythdc1
YTH domain-containing protein 1 isoform X1.
      
 0.919
ythdc2
Probable ATP-dependent RNA helicase YTHDC2 isoform X2.
     
 0.919
rbm15
Putative RNA-binding protein 15.
      
 0.912
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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