Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC108281054LOW QUALITY PROTEIN: low-density lipoprotein receptor-related protein 1-like. (4427 aa)    
Predicted Functional Partners:
LOC108266479
PTB domain-containing engulfment adapter protein 1 isoform X1.
    
 0.933
LOC108276358
PTB domain-containing engulfment adapter protein 1-like.
    
 0.924
LOC108265943
Calreticulin.
    
 0.918
LOC108280796
Calreticulin.
    
 0.918
calr3
Calreticulin.
    
 0.918
LOC108279317
Complement C1q subcomponent subunit A-like.
     
  0.902
LOC108278436
Complement C1q subcomponent subunit B-like.
     
  0.902
lrp1
Prolow-density lipoprotein receptor-related protein 1 isoform X1.
  
  
 
0.901
LOC108278434
Complement C1q subcomponent subunit C-like.
     
  0.900
ldlrap1
Low density lipoprotein receptor adapter protein 1 isoform X1.
    
 0.764
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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