Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
lancl1lanC-like protein 1. (405 aa)    
Predicted Functional Partners:
gss
Glutathione synthetase.
     
  0.900
txndc12
Thioredoxin domain-containing protein 12.
    
  0.900
gpx4
Glutathione peroxidase; Belongs to the glutathione peroxidase family.
     
  0.900
rb1cc1
RB1-inducible coiled-coil protein 1 isoform X1.
      
 0.650
LOC108271171
Putative gamma-glutamyltransferase YwrD isoform X4.
     
  0.650
gpx7
Glutathione peroxidase; Belongs to the glutathione peroxidase family.
     
  0.650
LOC108273566
Glutathione peroxidase; Belongs to the glutathione peroxidase family.
     
  0.650
gpx3
Glutathione peroxidase; Belongs to the glutathione peroxidase family.
     
  0.650
ggt6
Gamma-glutamyltransferase 6.
     
  0.650
prdx6
Peroxiredoxin-6.
     
  0.650
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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