Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
pcnpPEST proteolytic signal-containing nuclear protein isoform X3. (157 aa)    
Predicted Functional Partners:
gripap1
GRIP1-associated protein 1 isoform X1.
    
   0.925
tulp4
Tubby-related protein 4; Belongs to the TUB family.
      
 0.708
UHRF2
E3 ubiquitin-protein ligase UHRF2-like isoform X1.
    
 
 0.705
uhrf1
E3 ubiquitin-protein ligase UHRF1 isoform X1.
    
 
 0.705
ptges3
Prostaglandin E synthase 3.
   
    0.688
ube3c
Ubiquitin-protein ligase E3C.
      
 0.680
poli
DNA polymerase iota.
      
 0.646
mycbp2
E3 ubiquitin-protein ligase MYCBP2 isoform X10.
      
 0.644
lyplal1
Lysophospholipase-like protein 1.
      
 0.600
LOC108265073
Uncharacterized protein LOC108265073.
    
 
 0.591
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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