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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108262958Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily. (390 aa)    
Predicted Functional Partners:
slc40a1
Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily.
  
  
 
0.903
cp
Ceruloplasmin precursor; Belongs to the multicopper oxidase family.
    
 0.558
LOC108277111
Hephaestin-like protein 1; Belongs to the multicopper oxidase family.
    
 0.558
LOC108276644
LOW QUALITY PROTEIN: hephaestin-like protein 1; Belongs to the multicopper oxidase family.
    
 0.558
LOC108256549
Hephaestin-like protein 1; Belongs to the multicopper oxidase family.
    
 0.558
LOC108256642
Hephaestin-like protein 1 isoform X1; Belongs to the multicopper oxidase family.
    
 0.558
LOC108279904
Coagulation factor VIII-like; Belongs to the multicopper oxidase family.
    
 0.514
edil3
EGF-like repeat and discoidin I-like domain-containing protein 3 isoform X1.
    
 0.514
f5
Coagulation factor V; Belongs to the multicopper oxidase family.
    
 0.514
nrp2
Neuropilin; Belongs to the neuropilin family.
    
 0.507
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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