Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC108262958Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily. (390 aa)    
Predicted Functional Partners:
hamp
Hepcidin isoform X1.
     
 0.921
slc40a1
Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily.
  
  
 
0.903
cp
Ceruloplasmin precursor; Belongs to the multicopper oxidase family.
    
 0.608
LOC108277111
Hephaestin-like protein 1; Belongs to the multicopper oxidase family.
    
 0.608
LOC108276644
LOW QUALITY PROTEIN: hephaestin-like protein 1; Belongs to the multicopper oxidase family.
    
 0.608
LOC108256549
Hephaestin-like protein 1; Belongs to the multicopper oxidase family.
    
 0.608
LOC108256642
Hephaestin-like protein 1 isoform X1; Belongs to the multicopper oxidase family.
    
 0.608
LOC108266665
Cytochrome b reductase 1.
      
 0.592
LOC100304514
Natural resistance-associated macrophage protein medium transcript.
      
 0.544
LOC108258852
Amyloid beta A4 protein-like isoform X1.
    
 
 0.484
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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