Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC108258409Parvalbumin-7-like; Belongs to the parvalbumin family. (130 aa)    
Predicted Functional Partners:
sst1
Somatostatin-14; Somatostatin inhibits the release of somatotropin.
      
 0.923
sdf4
45 kDa calcium-binding protein.
      
 0.863
dcx
Neuronal migration protein doublecortin.
     
 0.826
bcan
Brevican core protein isoform X1.
    
 
 0.756
mecp2
methyl-CpG-binding protein 2 isoform X2.
     
 0.726
scn3b
Sodium channel subunit beta-3 isoform X1.
      
 0.724
gad2
Glutamate decarboxylase 2.
   
 
 0.715
pcna
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
      
 0.710
LOC108268663
Galanin peptides-like isoform X2.
      
 0.707
pxdn
Peroxidasin homolog.
      
 0.697
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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