Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
mtres1Uncharacterized protein C6orf203 homolog. (229 aa)    
Predicted Functional Partners:
c22h12orf65
Probable peptide chain release factor C12orf65 homolog, mitochondrial.
    
 0.907
mrpl58
peptidyl-tRNA hydrolase ICT1, mitochondrial.
    
 0.790
mrpl47
39S ribosomal protein L47, mitochondrial.
    
  0.790
qrsl1
Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in the mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the amidase family. GatA subfamily.
   
  
 0.770
malsu1
Mitochondrial assembly of ribosomal large subunit protein 1.
    
 0.767
LOC108255824
Uncharacterized protein LOC108255824 isoform X1; Belongs to the beta/gamma-crystallin family.
      
 0.759
mrpl28
39S ribosomal protein L28, mitochondrial isoform X2.
   
 0.733
mrpl42
39S ribosomal protein L42, mitochondrial isoform X2.
   
 0.731
mrpl2
39S ribosomal protein L2, mitochondrial.
   
 0.724
mrpl3
39S ribosomal protein L3, mitochondrial isoform X1; Belongs to the universal ribosomal protein uL3 family.
   
  0.723
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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