Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC108277926Leucine-rich repeat-containing protein 51-like. (183 aa)    
Predicted Functional Partners:
sf3a3
Splicing factor 3A subunit 3.
   
 0.905
snrpe
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.899
snrpd3
Small nuclear ribonucleoprotein Sm D3.
   
 0.891
snrpd2
Small nuclear ribonucleoprotein Sm D2.
   
 0.881
sf3b1
Splicing factor 3B subunit 1 isoform X1.
   
 0.878
sf3b3
Splicing factor 3B subunit 3.
    
 0.878
snrpg
Small nuclear ribonucleoprotein G.
   
 0.874
phf5a
PHD finger-like domain-containing protein 5A.
   
 0.872
sf3a1
Splicing factor 3A subunit 1 isoform X1.
   
 0.862
sf3b4
Splicing factor 3B subunit 4.
   
 0.861
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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