Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC108278507Homeobox protein Hox-B5a. (275 aa)    
Predicted Functional Partners:
hoxb7
Homeobox protein Hox-B7-A.
   
 
 0.924
LOC108278545
Homeobox protein Hox-B6a.
   
 
 0.835
LOC108273741
Homeobox protein Hox-B6b-like.
   
 
 0.835
hoxb4
Homeobox protein Hox-B4.
   
 
 0.813
LOC108255270
Homeobox protein Hox-C5-like.
   
   0.807
hoxc5
Homeobox protein Hox-C5.
   
   0.807
LOC108255269
Homeobox protein Hox-C4-like.
   
 
 0.665
hoxc4
Homeobox protein Hox-C4.
   
 
 0.665
LOC108278472
Homeobox protein Hox-B3a.
   
  
 0.662
hoxb2
Homeobox protein Hox-B2.
   
 
 0.651
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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