Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC108271113fetuin-B-like. (306 aa)    
Predicted Functional Partners:
plg
Plasminogen; Belongs to the peptidase S1 family.
   
 0.721
LOC108271429
Antihemorrhagic factor cHLP-B-like.
   
 0.689
LOC108267477
alpha-2-HS-glycoprotein-like.
   
 0.689
fga
Fibrinogen alpha chain.
   
 0.653
itih3
Inter-alpha-trypsin inhibitor heavy chain H3 isoform X2.
   
  
 0.644
APOH
Beta-2-glycoprotein 1.
   
 0.635
LOC108270509
Haptoglobin-like.
   
 0.603
wap65-1
Warm temperature acclimation protein 65 KDa-1 precursor.
   
 0.562
wap65-2
Warm temperature acclimation protein 65 KDa-2 isoform X2.
   
 0.562
LOC108271509
Serum paraoxonase/arylesterase 2-like.
   
  
 0.558
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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