Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC108279018Androglobin-like isoform X1; Belongs to the peptidase C2 family. (1002 aa)    
Predicted Functional Partners:
snap29
Synaptosomal-associated protein 29 isoform X1.
    
 0.869
vti1b
Vesicle transport through interaction with t-SNAREs homolog 1B.
    
 0.868
snap25
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.865
LOC108270282
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.865
stx12
Syntaxin-12; Belongs to the syntaxin family.
    
 0.832
stx7
Syntaxin-7; Belongs to the syntaxin family.
    
 0.817
stx11
Syntaxin-11 isoform X1; Belongs to the syntaxin family.
    
 0.810
LOC108274127
Syntaxin-4-like; Belongs to the syntaxin family.
    
 0.795
stx2
Syntaxin-2 isoform X2; Belongs to the syntaxin family.
    
 0.795
stx1a
syntaxin-1A isoform X1.
    
 0.795
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.