Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC108266054Forkhead-associated domain-containing protein 1-like. (1227 aa)    
Predicted Functional Partners:
znf407
Zinc finger protein 407.
      
 0.711
bcas3
Breast carcinoma-amplified sequence 3 isoform X2.
      
 0.678
LOC108270455
LOW QUALITY PROTEIN: sushi domain-containing protein 4-like.
      
 0.671
LOC108276272
Protein sel-1 homolog 3-like.
      
 0.528
LOC108277720
Protein sel-1 homolog 3-like.
      
 0.528
ttc34
Tetratricopeptide repeat protein 34.
      
 0.479
gldc
Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.
      
 0.471
armc3
Armadillo repeat-containing protein 3.
   
  
 0.428
sertad4
SERTA domain-containing protein 4.
      
 0.424
cenpk
Centromere protein K.
      
 0.420
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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