Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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[Homology]
Score
LOC108275604Guanylate cyclase. (919 aa)    
Predicted Functional Partners:
anfc4
C-type natriuretic peptide 4 precursor.
    
 0.985
LOC108265033
C-type natriuretic peptide 3-like.
     
 0.912
LOC108271041
Guanylate cyclase.
  
  
 
0.901
LOC108275703
C-type natriuretic peptide 2-like.
     
  0.900
nudt2
Bis(5'-nucleosyl)-tetraphosphatase [asymmetrical].
     
  0.900
LOC108260050
Guanylate cyclase.
     
 
0.900
LOC108265035
Natriuretic peptides A-like.
    
 0.879
mocs1
Molybdenum cofactor biosynthesis protein 1 isoform X1.
   
 
 0.809
pde5a
Phosphodiesterase.
   
 0.784
pde3b
Phosphodiesterase.
   
 0.782
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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