STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108255053Paired box protein Pax-7 isoform X2. (517 aa)    
Predicted Functional Partners:
timm22
Mitochondrial import inner membrane translocase subunit Tim22.
    
 0.843
timm10
Mitochondrial import inner membrane translocase subunit Tim10.
   
 0.742
timm9
Mitochondrial import inner membrane translocase subunit Tim9 isoform X2.
   
 
 0.710
sdhd
Succinate dehydrogenase [ubiquinone] cytochrome b small subunit; Membrane-anchoring subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q); Belongs to the CybS family.
    
 0.662
cactin
Cactin.
    
 0.604
cisd2
CDGSH iron-sulfur domain-containing protein 2.
    
 0.604
sdhc
Succinate dehydrogenase cytochrome b560 subunit, mitochondrial isoform X1.
    
 
 0.542
timm10b
Mitochondrial import inner membrane translocase subunit Tim10 B.
   
 
 0.538
ncoa1
Nuclear receptor coactivator 1 isoform X1.
     
 0.465
ncoa2
Nuclear receptor coactivator 2.
     
 0.465
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
Server load: low (22%) [HD]