Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC108258631Interferon-induced GTP-binding protein Mx1-like isoform X1; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (625 aa)    
Predicted Functional Partners:
gak
cyclin-G-associated kinase isoform X2.
   
 0.902
rsad2
Radical S-adenosyl methionine domain-containing protein 2.
   
  
 0.778
itsn2
LOW QUALITY PROTEIN: intersectin-2.
    
 
 0.717
ENSIPUP00000019729
annotation not available
    
 
 0.717
LOC108269989
Intersectin-2-like isoform X1.
    
 
 0.717
dnajc6
Putative tyrosine-protein phosphatase auxilin isoform X1.
   
 0.692
usp18
Ubl carboxyl-terminal hydrolase 18; Belongs to the peptidase C19 family.
   
 0.690
eif2ak2
Interferon-induced, double-stranded RNA-activated protein kinase isoform X2.
   
 0.658
itsn1
Intersectin-1 isoform X2.
    
 
 0.599
pink1
Serine/threonine-protein kinase PINK1, mitochondrial.
    
 0.565
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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