STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108269281ephrin-A4-like isoform X1; Belongs to the ephrin family. (206 aa)    
Predicted Functional Partners:
LOC108271798
Ephrin type-A receptor 2-like.
   
 0.911
epha2
Ephrin type-A receptor 2.
   
 0.904
met
Hepatocyte growth factor receptor isoform X1.
   
 0.746
ntrk1
Tyrosine-protein kinase receptor.
    
 0.725
ntrk2
Tyrosine-protein kinase receptor.
    
 0.725
LOC108259739
Tyrosine-protein kinase receptor.
    
 0.725
epha4
Ephrin type-A receptor 4 isoform X4.
   
 0.704
LOC108267827
Tyrosine-protein kinase receptor.
    
  0.703
LOC108271091
Tyrosine-protein kinase receptor.
    
  0.703
igf1r
Tyrosine-protein kinase receptor.
    
  0.703
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.