Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-expression
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[Homology]
Score
LOC108278245A-kinase anchor protein 1, mitochondrial-like. (865 aa)    
Predicted Functional Partners:
prkacb
cAMP-dependent protein kinase catalytic subunit beta isoform X1; Belongs to the protein kinase superfamily.
    
 0.871
kapca
Camp-dependent protein kinase catalytic subunit alpha isoform X1; Belongs to the protein kinase superfamily.
    
 0.871
prkaca
cAMP-dependent protein kinase catalytic subunit alpha; Belongs to the protein kinase superfamily.
    
 0.871
LOC108267323
cAMP-dependent protein kinase catalytic subunit beta isoform X2; Belongs to the protein kinase superfamily.
    
 0.871
prkar1b
cAMP-dependent protein kinase type I-beta regulatory subunit.
    
 0.801
LOC108265715
cAMP-dependent protein kinase type II-alpha regulatory subunit-like.
    
 0.801
LOC108274040
cAMP-dependent protein kinase type I-alpha regulatory subunit.
    
 0.801
prkar1a
cAMP-dependent protein kinase type I-alpha regulatory subunit.
    
 0.801
LOC108254707
cAMP-dependent protein kinase type II-beta regulatory subunit-like.
    
 0.801
LOC108275286
cAMP-dependent protein kinase type II-beta regulatory subunit-like.
    
 0.801
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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