Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
epha8Ephrin type-A receptor 8. (1027 aa)    
Predicted Functional Partners:
LOC108279071
ephrin-A5b-like; Belongs to the ephrin family.
   
 0.924
LOC108265807
ephrin-A5b-like isoform X1; Belongs to the ephrin family.
   
 0.924
LOC108278079
ephrin-A2-like; Belongs to the ephrin family.
   
 0.915
LOC108270832
ephrin-A2-like isoform X1; Belongs to the ephrin family.
   
 0.915
LOC108269829
ephrin-A1-like; Belongs to the ephrin family.
   
 0.905
LOC108273217
ephrin-A1-like isoform X2; Belongs to the ephrin family.
   
 0.905
LOC108254910
ephrin-A3-like isoform X2; Belongs to the ephrin family.
   
 0.888
LOC108272373
ephrin-A3-like; Belongs to the ephrin family.
   
 0.888
LOC108269281
ephrin-A4-like isoform X1; Belongs to the ephrin family.
   
 0.772
efnb3
ephrin-B3; Belongs to the ephrin family.
   
 0.649
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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