STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108265564Pepsin A-like; Belongs to the peptidase A1 family. (373 aa)    
Predicted Functional Partners:
agt
Angiotensinogen; Belongs to the serpin family.
   
 0.622
ctsh
Pro-cathepsin H precursor; Belongs to the peptidase C1 family.
   
 0.511
ctsb
Cathepsin Ba; Belongs to the peptidase C1 family.
   
 0.496
ctsw
Cathepsin F; Belongs to the peptidase C1 family.
   
 0.473
ctsc
Dipeptidyl peptidase 1; Belongs to the peptidase C1 family.
   
 0.451
ide
Insulin-degrading enzyme isoform X1; Belongs to the peptidase M16 family.
     
 0.451
ctso
Cathepsin O; Belongs to the peptidase C1 family.
   
 0.433
LOC108259543
Renin receptor-like.
   
 0.426
atp6ap2
Renin receptor.
   
 0.426
ENSIPUP00000014252
annotation not available
   
 0.426
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.