Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
vdac2Voltage-dependent anion-selective channel protein 2. (283 aa)    
Predicted Functional Partners:
LOC108273102
ADP/ATP translocase 1-like; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
 0.929
slc25a5
ADP/ATP translocase 2; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
 0.929
LOC108260169
ADP/ATP translocase 2-like; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
 0.929
LOC108266970
ADP/ATP translocase 2-like; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
 0.929
slc25a4
ADP/ATP translocase 1; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
 0.929
vdac2-2
Voltage-dependent anion-selective channel protein 2.
  
  
 
0.909
LOC108273854
Voltage-dependent anion-selective channel protein 2-like.
  
  
 
0.901
tomm20
Mitochondrial import receptor subunit tom20-like protein.
   
 0.884
prkn
Parkin RBR E3 ubiquitin protein ligase.
    
 0.875
Ppif
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
 0.855
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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