STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108272266Regulator of G-protein signaling 4-like. (206 aa)    
Predicted Functional Partners:
LOC108265815
Guanine nucleotide-binding protein G(T) subunit alpha-2-like.
   
 0.610
fam126b
Protein FAM126B isoform X1.
    
 
 0.573
LOC108271325
Protein FAM126B-like isoform X2.
    
 
 0.573
LOC108272574
Myosin-10-like isoform X6; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
      
 0.571
cse1l
Exportin-2.
      
 0.571
LOC108271008
Guanine nucleotide-binding protein G(O) subunit alpha-like isoform X1.
  
 0.555
csnk1a1
Casein kinase I isoform X4; Belongs to the protein kinase superfamily.
    
 0.536
LOC108279456
Mitogen-activated protein kinase.
   
 
 0.508
apc
Adenomatous polyposis coli protein isoform X1.
    
 0.487
apc2
Adenomatous polyposis coli protein 2.
    
 0.487
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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