STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tnk1Non-receptor tyrosine-protein kinase TNK1; Belongs to the protein kinase superfamily. Tyr protein kinase family. (737 aa)    
Predicted Functional Partners:
LOC108256494
Growth factor receptor-bound protein 2.
    
 0.857
grb2
Growth factor receptor-bound protein 2 isoform X1.
    
 0.857
cltc
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
    
 
 0.707
cdc42
Cell division control protein 42-like protein.
    
 
 0.702
LOC108276251
Cell division control protein 42 homolog.
    
 
 0.702
snx9
Sorting nexin.
    
 
 0.667
nck1
Cytoplasmic protein.
    
 
 0.640
nck2
Cytoplasmic protein.
    
 
 0.640
LOC108273233
Cytoplasmic protein NCK2-like.
    
 
 0.640
LOC108272678
Cell division control protein 42 homolog.
    
 
 0.613
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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