Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC108256617Exostosin-1a isoform X1; Belongs to the glycosyltransferase 47 family. (734 aa)    
Predicted Functional Partners:
extl3
Exostosin-like 3; Belongs to the glycosyltransferase 47 family.
   
0.944
ext2
Exostosin-2; Belongs to the glycosyltransferase 47 family.
    
 0.891
mdga1
MAM domain-containing glycosylphosphatidylinositol anchor protein 1 isoform X1.
     
 0.747
rnpc3
RNA-binding protein 40.
      
 0.708
LOC108274195
Dual specificity mitogen-activated protein kinase kinase 4-like isoform X1; Belongs to the protein kinase superfamily.
      
 0.614
sdc2
Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.
    
 0.540
xbp1
LOW QUALITY PROTEIN: X-box-binding protein 1.
     
 0.514
LOC108276565
Contactin-associated protein-like 4 isoform X1.
   
  
 0.503
sdc3
Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.
   
 
 0.496
LOC108272016
Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.
     
 0.489
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.